PReSTO version control and releases

We have placed each individual software package in PReSTO under version control. Every PReSTO release come with a specific default (D) version installed for each individual MX software package. We can then test new versions of installed software, without disturbing the already installed MX software version. Prior to version control, every new install overwrite the previous installation.

The PReSTO menu is connected to the default (D) version of the latest release.

Sometimes researchers want to use the very latest version of an individual MX software package. The very latest version might already be installed, however not yet released due to testing and configuring of many packages that made up a PReSTO release. To see what versions are installed and available of each MX software package, please e.g. use module avail Phenix or module --ignore-cache avail Phenix to get a list of Phenix versions installed.

Major PReSTO releases, minor PReSTO releases and software default versions

In March 2021, all PReSTO softwares at NSC Tetralith defaults (D) into versions that correspond to PReSTO 5.0 release. At LUNARC Aurora and at MAX IV cluster the default versions of PReSTO software currently (March 2021) corresponds to PReSTO release 4.1, a minor release with small updates compared to 4.0. Staff at MAX IV need to test critical software packages before defaults version is changed into release 5.0. Sometimes BUG fixes and minor changes motivate a minor PReSTO release but minor PReSTO releases are not tracked at this page.

PReSTO release: PReSTO-4.0 PReSTO-5.0

CCP4

7.0.078

7.0.078

CNS

1.3

1.3

Phenix

1.18.2

1.19.2

XDS

20200417

20210205

generate_XDS.INP

0.94

1.02

DIALS in CCP4

1.14.13

1.14.13

DIALS standalone

2.2.5

2.2.5

XDSAPP

2.99.1

2.99.1

XDSGUI

20190417

20201022

XDS-Viewer

0.6

0.6

XDSSTAT

20151203

20151203

ALBULA

3.2.0-2

3.2.0-2

adxv

1.9.14

1.9.14

SHELX in CCP4

CCP4 078

CCP4 078

ShelXle

1113

1229

hkl2map

0.4.e-beta

0.4.e-beta

SHARP

2.8.11

2.8.12

ARP/wARP in CCP4

CCP4 078

CCP4 078

BUSTER

20200520

20210224

pipedream

1.2.4

1.3.0

rhofit

1.2.7

1.2.7

SnB

0.6

0.6

Rosetta in Phenix

3.10

3.10

arcimboldo_lite in CCP4

CCP4 078

CCP4 078

Xia2 in CCP4

0.5.902

0.5.902

Xia2 standalone DIALS

0.6.467

0.6.467

PyMOL

2.3.0

2.3.0

XDSME

0.6.6

0.6.6

autoPROC

20200520

20210224

H5ToXds

1.1.0

1.1.0

Chimera

1.13

1.15

ChimeraX

0.9

1.1

XDSCC12

20170501

20201209

Uppsala Software Factory

20110630

20110630

iMosflm

7.3.0

7.3.0

Relion (with and without CUDA)

3.0.7

3.0.7

ctffind (with and without CUDA)

4.1.13

4.1.13

EMAN2

2.21a

2.21a

Gctf

1.06

1.06

Gautomatch

0.56

0.56

Motioncor2

1.3.2

1.3.2

nXDS

20191118

20201021

CrystFEL

0.9.1

0.9.1

Cheetah

0.2.1

0.2.1


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